STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM49975.1Nitroreductase. (372 aa)    
Predicted Functional Partners:
SEM18592.1
NAD(P)-dependent iron-only hydrogenase catalytic subunit.
   
 0.984
SEM41167.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.961
SEM18621.1
NADH-quinone oxidoreductase subunit F.
    
 0.925
SEM22449.1
Formate dehydrogenase major subunit.
   
 0.919
SEM39496.1
Glutamate synthase domain-containing protein 1.
  
 
 0.908
SEM51423.1
Tungsten-dependent benzoyl-CoA reductase-related protein bamH.
    
 0.896
SEM05269.1
Methionine synthase (B12-dependent).
  
 
 0.893
SEM66229.1
Homocysteine S-methyltransferase.
  
 
 0.891
SEM14285.1
Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
 
 0.875
SEM05510.1
NADH:flavin oxidoreductase / NADH oxidase family protein.
 
 
 0.849
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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