STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM50055.1FdhE protein; Necessary for formate dehydrogenase activity. Belongs to the FdhE family. (293 aa)    
Predicted Functional Partners:
SEM01335.1
Formate dehydrogenase (quinone-dependent) catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 
 0.841
SEM50114.1
Formate dehydrogenase major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 
 0.841
SEM50094.1
Formate dehydrogenase major subunit.
 
 
 
 0.836
SEM01306.1
Formate dehydrogenase major subunit.
 
 
 
 0.814
SEM50133.1
Formate dehydrogenase (quinone-dependent) iron-sulfur subunit.
 
  
 0.767
SEM01349.1
Formate dehydrogenase (quinone-dependent) iron-sulfur subunit.
 
  
 0.764
SEM50154.1
Formate dehydrogenase subunit gamma.
 
  
 0.700
SEM01362.1
Formate dehydrogenase subunit gamma.
 
  
 0.691
SEM53437.1
Peroxiredoxin.
  
     0.656
SEM65337.1
Tat (twin-arginine translocation) pathway signal sequence.
 
  
 0.570
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.