STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM51605.1Hypothetical protein. (138 aa)    
Predicted Functional Partners:
SEM20271.1
Glucosamine--fructose-6-phosphate aminotransferase (isomerizing).
  
     0.744
SEL95412.1
Type IV pilus assembly protein PilP.
  
     0.726
SEM53900.1
Protein of unknown function.
  
     0.726
SEL93307.1
Hypothetical protein.
  
     0.725
SEM23742.1
LysM domain-containing protein.
  
     0.703
SEM29251.1
Helicase conserved C-terminal domain-containing protein.
  
     0.674
SEM37993.1
TolB amino-terminal domain-containing protein.
  
     0.655
SEM07178.1
Hypothetical protein.
  
     0.641
SEM78450.1
Response regulator receiver domain-containing protein.
  
     0.622
SEM32518.1
Putative negative regulator of RcsB-dependent stress response.
  
     0.585
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.