STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM51970.1General secretion pathway protein K. (322 aa)    
Predicted Functional Partners:
SEM51954.1
General secretion pathway protein J.
 
 
 0.973
SEM51929.1
General secretion pathway protein I.
 
 
 0.962
SEM52005.1
General secretion pathway protein M.
 
  
 0.959
SEM51921.1
General secretion pathway protein H.
 
     0.950
SEM51986.1
General secretion pathway protein L.
 
  
 0.947
SEM51895.1
Type II secretion system protein G (GspG).
 
 
 0.939
SEM73547.1
General secretion pathway protein K.
  
  
  0.934
SEM52030.1
General secretion pathway protein C.
 
  
 0.926
SEM73564.1
General secretion pathway protein J.
  
 
 0.922
SEM51846.1
General secretion pathway protein D.
 
   
 0.839
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.