STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM53421.1Peroxiredoxin (alkyl hydroperoxide reductase subunit C). (202 aa)    
Predicted Functional Partners:
SEM53437.1
Peroxiredoxin.
 
     0.950
SEM05269.1
Methionine synthase (B12-dependent).
    
  0.759
SEM66229.1
Homocysteine S-methyltransferase.
    
  0.758
engB
GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.
       0.539
SEM53398.1
Two-component system, NtrC family, response regulator AtoC.
       0.539
msrB
Peptide methionine sulfoxide reductase msrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
  
 0.512
SEM43638.1
Peroxiredoxin Q/BCP.
  
     0.505
SEM53462.1
Membrane-bound lytic murein transglycosylase A.
       0.470
SEM65219.1
Rhodanese-related sulfurtransferase.
 
     0.457
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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