STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM53577.1glutaryl-CoA dehydrogenase (non-decarboxylating). (383 aa)    
Predicted Functional Partners:
SEL95069.1
Electron transfer flavoprotein alpha subunit apoprotein.
 0.976
SEL95088.1
Electron transfer flavoprotein beta subunit.
 
 
 0.963
SEM20176.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.960
SEM51196.1
3-hydroxyacyl-CoA dehydrogenase, C-terminal domain.
 
 0.959
SEM41167.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 0.949
SEM53603.1
Acetyl-CoA carboxylase, carboxyltransferase component.
 
 
 0.869
SEM14285.1
Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
     
 0.819
SEM53041.1
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
 0.782
ribBA
GTP cyclohydrolase II /3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.767
SEM19990.1
Enoyl-CoA hydratase/carnithine racemase.
  
 0.745
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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