Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEM32910.1 | SEM54365.1 | SAMN04489760_110112 | SAMN04489760_1212 | DNA modification methylase. | Type III restriction enzyme. | 0.549 |
SEM32910.1 | SEM82502.1 | SAMN04489760_110112 | SAMN04489760_1558 | DNA modification methylase. | DNA modification methylase. | 0.444 |
SEM54347.1 | SEM54365.1 | SAMN04489760_1211 | SAMN04489760_1212 | Putative DNA-binding domain-containing protein. | Type III restriction enzyme. | 0.782 |
SEM54347.1 | SEM54385.1 | SAMN04489760_1211 | SAMN04489760_1213 | Putative DNA-binding domain-containing protein. | Glycosyl transferase family 2. | 0.461 |
SEM54347.1 | SEM54402.1 | SAMN04489760_1211 | SAMN04489760_1214 | Putative DNA-binding domain-containing protein. | Ribosomal protein S18 acetylase RimI. | 0.529 |
SEM54347.1 | SEM54422.1 | SAMN04489760_1211 | SAMN04489760_1215 | Putative DNA-binding domain-containing protein. | Protein of unknown function. | 0.460 |
SEM54365.1 | SEM32910.1 | SAMN04489760_1212 | SAMN04489760_110112 | Type III restriction enzyme. | DNA modification methylase. | 0.549 |
SEM54365.1 | SEM54347.1 | SAMN04489760_1212 | SAMN04489760_1211 | Type III restriction enzyme. | Putative DNA-binding domain-containing protein. | 0.782 |
SEM54365.1 | SEM54385.1 | SAMN04489760_1212 | SAMN04489760_1213 | Type III restriction enzyme. | Glycosyl transferase family 2. | 0.460 |
SEM54365.1 | SEM54402.1 | SAMN04489760_1212 | SAMN04489760_1214 | Type III restriction enzyme. | Ribosomal protein S18 acetylase RimI. | 0.460 |
SEM54365.1 | SEM54422.1 | SAMN04489760_1212 | SAMN04489760_1215 | Type III restriction enzyme. | Protein of unknown function. | 0.460 |
SEM54365.1 | SEM59425.1 | SAMN04489760_1212 | SAMN04489760_12510 | Type III restriction enzyme. | Adenine-specific DNA-methyltransferase. | 0.887 |
SEM54365.1 | SEM68597.1 | SAMN04489760_1212 | SAMN04489760_13425 | Type III restriction enzyme. | UvrD/REP helicase N-terminal domain-containing protein. | 0.788 |
SEM54365.1 | SEM68654.1 | SAMN04489760_1212 | SAMN04489760_13428 | Type III restriction enzyme. | Hypothetical protein. | 0.788 |
SEM54365.1 | SEM68707.1 | SAMN04489760_1212 | SAMN04489760_13430 | Type III restriction enzyme. | Adenine-specific DNA-methyltransferase. | 0.887 |
SEM54365.1 | SEM82502.1 | SAMN04489760_1212 | SAMN04489760_1558 | Type III restriction enzyme. | DNA modification methylase. | 0.549 |
SEM54385.1 | SEM54347.1 | SAMN04489760_1213 | SAMN04489760_1211 | Glycosyl transferase family 2. | Putative DNA-binding domain-containing protein. | 0.461 |
SEM54385.1 | SEM54365.1 | SAMN04489760_1213 | SAMN04489760_1212 | Glycosyl transferase family 2. | Type III restriction enzyme. | 0.460 |
SEM54385.1 | SEM54402.1 | SAMN04489760_1213 | SAMN04489760_1214 | Glycosyl transferase family 2. | Ribosomal protein S18 acetylase RimI. | 0.773 |
SEM54385.1 | SEM54422.1 | SAMN04489760_1213 | SAMN04489760_1215 | Glycosyl transferase family 2. | Protein of unknown function. | 0.991 |
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