STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM54803.1Radical SAM superfamily enzyme, MoaA/NifB/PqqE/SkfB family. (355 aa)    
Predicted Functional Partners:
moaC
Cyclic pyranopterin monophosphate synthase subunit MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.
 
 
 0.959
SEM54977.1
Glycosyltransferase, GT2 family.
  
 
 0.874
SEM54822.1
Radical SAM additional 4Fe4S-binding SPASM domain-containing protein.
 
  
 0.868
SEM14860.1
PAS domain S-box-containing protein.
  
  0.866
SEM24218.1
PAS domain S-box-containing protein.
   
  0.861
SEL96326.1
PAS domain S-box-containing protein.
  
  0.859
SEL96462.1
PAS domain S-box-containing protein.
  
  0.859
SEM66668.1
Signal transduction histidine kinase.
  
  0.859
SEM63494.1
PAS domain-containing protein.
   
 0.847
SEM01299.1
PAS domain S-box-containing protein.
   
 0.846
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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