STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM54868.12-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase. (384 aa)    
Predicted Functional Partners:
SEM54720.1
Glucose-1-phosphate cytidylyltransferase.
 
  
 0.907
SEM54679.1
CDP-glucose 4,6-dehydratase.
 
  
 0.849
SEM54845.1
Hypothetical protein.
 
    0.810
SEM54737.1
N-acetylneuraminate synthase.
     
 0.804
SEM54803.1
Radical SAM superfamily enzyme, MoaA/NifB/PqqE/SkfB family.
     
 0.801
SEM54786.1
Acetolactate synthase-1/2/3 large subunit; Belongs to the TPP enzyme family.
 
     0.795
SEM54822.1
Radical SAM additional 4Fe4S-binding SPASM domain-containing protein.
       0.774
SEM54977.1
Glycosyltransferase, GT2 family.
  
 
 0.768
SEM54758.1
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase).
       0.748
SEM54933.1
Methyltransferase, FkbM family.
 
 
 0.747
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.