STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM56336.1Hypothetical protein. (277 aa)    
Predicted Functional Partners:
SEM47898.1
Cell division protein DedD (protein involved in septation).
  
     0.644
SEM56351.1
Hypothetical protein.
 
     0.630
SEM56297.1
MJ0042 family finger-like domain-containing protein.
 
     0.627
SEM37968.1
Hypothetical protein.
  
     0.611
SEM58671.1
CRISPR-associated protein Cmr3.
  
     0.599
SEM51986.1
General secretion pathway protein L.
  
     0.588
SEM07178.1
Hypothetical protein.
  
     0.586
SEM38032.1
Uncharacterized conserved protein YafD, endonuclease/exonuclease/phosphatase (EEP) superfamily.
  
     0.586
SEM55738.1
PilZ domain-containing protein.
  
     0.582
SEM41537.1
Bacterioferritin.
  
     0.572
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.