STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM56949.1Hemolysin activation/secretion protein. (569 aa)    
Predicted Functional Partners:
SEM56974.1
Filamentous hemagglutinin family N-terminal domain-containing protein.
 
 0.931
SEM56900.1
Filamentous hemagglutinin family N-terminal domain-containing protein.
 
 0.919
SEM56982.1
Filamentous hemagglutinin family N-terminal domain-containing protein.
 
 0.905
SEM56936.1
SapC protein.
 
     0.804
SEM56916.1
Tetratricopeptide repeat-containing protein.
 
     0.790
SEM49244.1
Hypothetical protein.
 
 0.544
SEM71141.1
Type I secretion C-terminal target domain (VC_A0849 subclass).
 
  
 0.535
SEM41279.1
Hypothetical protein.
  
 0.459
SEM06003.1
Hypothetical protein.
  
 0.450
SEM58173.1
Chaperone of endosialidase.
  
 0.450
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.