STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM57008.1Hypothetical protein. (273 aa)    
Predicted Functional Partners:
SEM57022.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
       0.690
SEM51159.1
Hypothetical protein.
  
     0.473
SEM23572.1
Hypothetical protein.
  
     0.469
SEM56982.1
Filamentous hemagglutinin family N-terminal domain-containing protein.
       0.463
SEM20140.1
Hypothetical protein.
  
     0.454
SEM39653.1
Amidohydrolase.
  
     0.438
SEM57042.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
       0.429
SEM15853.1
Aldehyde dehydrogenase (NAD+).
 
 
 0.428
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.