STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM58614.1Hypothetical protein. (37 aa)    
Predicted Functional Partners:
SEM58630.1
CRISPR-associated protein, Cmr1 family.
       0.773
SEM58654.1
CRISPR-associated protein, Cmr2 family.
       0.773
SEM58671.1
CRISPR-associated protein Cmr3.
       0.773
SEM58683.1
CRISPR-associated protein, Cmr4 family.
       0.757
SEM58705.1
CRISPR-associated protein Cmr5.
       0.757
SEM58722.1
CRISPR-associated protein Cmr6.
       0.726
SEM58741.1
Uncharacterized conserved protein, DUF433 family.
       0.584
SEM58580.1
Uncharacterized conserved protein.
       0.532
SEM58600.1
CRISPR-associated protein, Csx6 family.
       0.532
SEM58761.1
Putative CRISPR-associated protein, APE2256 family.
       0.467
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.