STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM59425.1Adenine-specific DNA-methyltransferase. (100 aa)    
Predicted Functional Partners:
SEM59464.1
Hypothetical protein.
 
     0.911
SEM54365.1
Type III restriction enzyme.
 
  
 0.887
SEM68597.1
UvrD/REP helicase N-terminal domain-containing protein.
 
     0.785
SEM68654.1
Hypothetical protein.
 
     0.785
SEM59442.1
Putative ATP-dependent DNA helicase recG C-terminal.
       0.603
SEM59404.1
Carbonic anhydrase.
       0.529
SEM01509.1
HsdM N-terminal domain-containing protein.
     
 0.449
SEM69079.1
Hypothetical protein.
 
     0.431
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
Server load: low (22%) [HD]