STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM59634.1Cysteine protease, C1A family. (306 aa)    
Predicted Functional Partners:
SEM70257.1
Serpin B; Belongs to the serpin family.
   
 0.871
SEM69330.1
Peptidyl-prolyl cis-trans isomerase A (cyclophilin A); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 
 0.840
SEM05805.1
ATPase family associated with various cellular activities (AAA).
  
 
 0.818
SEM71563.1
Small redox-active disulfide protein 2.
    
 0.727
SEM20946.1
Copper-resistance protein, CopA family.
   
 
 0.708
SEM59608.1
Hypothetical protein.
       0.701
SEM19691.1
Small GTP-binding protein domain-containing protein.
   
 0.697
SEM51741.1
Phospholipid-binding protein, PBP family.
   
 
 0.623
SEM59669.1
Hypothetical protein.
       0.523
SEM59690.1
Hypothetical protein.
 
     0.519
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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