STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM60644.1Two-component system, NtrC family, response regulator PilR. (455 aa)    
Predicted Functional Partners:
SEM60630.1
Two-component system, NtrC family, sensor histidine kinase PilS.
 
  0.966
SEM26337.1
RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
  
 0.955
SEM36916.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 0.907
SEL96326.1
PAS domain S-box-containing protein.
  
 0.905
SEL96462.1
PAS domain S-box-containing protein.
  
0.905
SEM66668.1
Signal transduction histidine kinase.
  
 0.905
SEM24218.1
PAS domain S-box-containing protein.
  
 0.864
SEM63494.1
PAS domain-containing protein.
  
0.864
SEM01299.1
PAS domain S-box-containing protein.
  
0.858
SEM01949.1
PAS domain S-box-containing protein.
  
 0.858
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.