Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SEM15853.1 | SEM38667.1 | SAMN04489760_105141 | SAMN04489760_1133 | Aldehyde dehydrogenase (NAD+). | Chorismate mutase / prephenate dehydratase. | 0.666 |
| SEM15853.1 | SEM39496.1 | SAMN04489760_105141 | SAMN04489760_11340 | Aldehyde dehydrogenase (NAD+). | Glutamate synthase domain-containing protein 1. | 0.908 |
| SEM15853.1 | SEM59754.1 | SAMN04489760_105141 | SAMN04489760_12525 | Aldehyde dehydrogenase (NAD+). | Glycerol dehydratase, cobalamin-independent, large subunit. | 0.740 |
| SEM15853.1 | SEM63077.1 | SAMN04489760_105141 | SAMN04489760_12818 | Aldehyde dehydrogenase (NAD+). | Pyrroline-5-carboxylate reductase. | 0.478 |
| SEM15853.1 | guaA | SAMN04489760_105141 | SAMN04489760_11352 | Aldehyde dehydrogenase (NAD+). | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.491 |
| SEM15853.1 | proA | SAMN04489760_105141 | SAMN04489760_11261 | Aldehyde dehydrogenase (NAD+). | Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.681 |
| SEM15853.1 | proB | SAMN04489760_105141 | SAMN04489760_12247 | Aldehyde dehydrogenase (NAD+). | Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. | 0.681 |
| SEM38667.1 | SEM15853.1 | SAMN04489760_1133 | SAMN04489760_105141 | Chorismate mutase / prephenate dehydratase. | Aldehyde dehydrogenase (NAD+). | 0.666 |
| SEM38667.1 | SEM39496.1 | SAMN04489760_1133 | SAMN04489760_11340 | Chorismate mutase / prephenate dehydratase. | Glutamate synthase domain-containing protein 1. | 0.524 |
| SEM38667.1 | SEM63077.1 | SAMN04489760_1133 | SAMN04489760_12818 | Chorismate mutase / prephenate dehydratase. | Pyrroline-5-carboxylate reductase. | 0.421 |
| SEM38667.1 | guaA | SAMN04489760_1133 | SAMN04489760_11352 | Chorismate mutase / prephenate dehydratase. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.625 |
| SEM38667.1 | proA | SAMN04489760_1133 | SAMN04489760_11261 | Chorismate mutase / prephenate dehydratase. | Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.629 |
| SEM38667.1 | proB | SAMN04489760_1133 | SAMN04489760_12247 | Chorismate mutase / prephenate dehydratase. | Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. | 0.576 |
| SEM39496.1 | SEM15853.1 | SAMN04489760_11340 | SAMN04489760_105141 | Glutamate synthase domain-containing protein 1. | Aldehyde dehydrogenase (NAD+). | 0.908 |
| SEM39496.1 | SEM38667.1 | SAMN04489760_11340 | SAMN04489760_1133 | Glutamate synthase domain-containing protein 1. | Chorismate mutase / prephenate dehydratase. | 0.524 |
| SEM39496.1 | SEM63077.1 | SAMN04489760_11340 | SAMN04489760_12818 | Glutamate synthase domain-containing protein 1. | Pyrroline-5-carboxylate reductase. | 0.494 |
| SEM39496.1 | guaA | SAMN04489760_11340 | SAMN04489760_11352 | Glutamate synthase domain-containing protein 1. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.632 |
| SEM39496.1 | proA | SAMN04489760_11340 | SAMN04489760_11261 | Glutamate synthase domain-containing protein 1. | Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.895 |
| SEM39496.1 | proB | SAMN04489760_11340 | SAMN04489760_12247 | Glutamate synthase domain-containing protein 1. | Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. | 0.491 |
| SEM39496.1 | topA | SAMN04489760_11340 | SAMN04489760_105117 | Glutamate synthase domain-containing protein 1. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.855 |
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