STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM62896.1Putative ABC transport system permease protein. (412 aa)    
Predicted Functional Partners:
SEM62908.1
Putative ABC transport system ATP-binding protein.
 
 0.975
SEM62876.1
Outer membrane lipoprotein-sorting protein.
 
 
 
 0.963
SEM62861.1
Hypothetical protein.
 
     0.933
lolD
Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
 
 0.922
SEM18072.1
Lipoprotein-releasing system permease protein.
  
  
 
0.776
SEM20376.1
Outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
   
 
 0.758
SEM03915.1
Putative ABC transport system ATP-binding protein.
 
 0.684
SEM25814.1
Putative ABC transport system ATP-binding protein.
 
 0.679
SEM68539.1
Putative ABC transport system ATP-binding protein.
 
 0.662
SEM65820.1
Putative ABC transport system ATP-binding protein.
  
 0.618
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.