STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM64935.1Tungsten-dependent benzoyl-CoA reductase-related protein bamE. (1039 aa)    
Predicted Functional Partners:
SEM64918.1
Coenzyme F420-reducing hydrogenase, delta subunit.
 0.986
SEM51384.1
Coenzyme F420-reducing hydrogenase, delta subunit.
 
 0.922
SEM68056.1
4Fe-4S binding domain-containing protein.
 
 0.853
SEM74151.1
4Fe-4S binding domain-containing protein.
 
 0.853
SEM18621.1
NADH-quinone oxidoreductase subunit F.
   
  0.755
SEM18556.1
NAD-reducing hydrogenase small subunit.
  
 0.724
SEM51593.1
Fe-S-cluster-containing dehydrogenase component.
 
  
  0.623
SEM45399.1
[NiFe]-hydrogenase I apoprotein, large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
  
 0.606
SEM51285.1
Fe-S-cluster-containing dehydrogenase component.
 
  
  0.602
SEM30909.1
Sulfide dehydrogenase (flavoprotein) subunit SudA.
 
   
  0.580
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.