STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM65053.1Fe-S oxidoreductase. (379 aa)    
Predicted Functional Partners:
SEM41167.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.924
SEM30909.1
Sulfide dehydrogenase (flavoprotein) subunit SudA.
   
  0.838
SEM14285.1
Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
 
 0.821
SEM39496.1
Glutamate synthase domain-containing protein 1.
    
 0.810
SEM64918.1
Coenzyme F420-reducing hydrogenase, delta subunit.
    
 0.743
SEM65031.1
Uncharacterized membrane protein YdjX, TVP38/TMEM64 family, SNARE-associated domain.
 
     0.729
SEM09826.1
4Fe-4S binding domain-containing protein.
  
 
 0.540
SEM65168.1
Radical SAM superfamily enzyme, MoaA/NifB/PqqE/SkfB family.
 
     0.528
SEM51384.1
Coenzyme F420-reducing hydrogenase, delta subunit.
  
 
 0.523
SEM65016.1
Hypothetical protein.
       0.522
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.