STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM65294.1Hypothetical protein. (184 aa)    
Predicted Functional Partners:
SEM65278.1
Hypothetical protein.
 
    0.958
SEM49832.1
Selenium metabolism protein YedF; Belongs to the sulfur carrier protein TusA family.
  
  
 0.753
SEM65262.1
Hypothetical protein.
       0.545
SEM76998.1
Pyridoxamine 5'-phosphate oxidase.
  
   
 0.511
SEM65353.1
DNA-binding transcriptional regulator, FrmR family.
       0.487
SEM65337.1
Tat (twin-arginine translocation) pathway signal sequence.
  
    0.482
SEM65320.1
Cytochrome b subunit of formate dehydrogenase.
  
    0.475
SEM43402.1
Hypothetical protein.
 
  
 0.421
SEM39496.1
Glutamate synthase domain-containing protein 1.
      
 0.406
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.