STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM65337.1Tat (twin-arginine translocation) pathway signal sequence. (336 aa)    
Predicted Functional Partners:
SEM65320.1
Cytochrome b subunit of formate dehydrogenase.
 
 0.977
SEM41167.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.921
SEM01362.1
Formate dehydrogenase subunit gamma.
 
 0.874
SEM50154.1
Formate dehydrogenase subunit gamma.
 
 0.868
SEM01335.1
Formate dehydrogenase (quinone-dependent) catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.863
SEM09826.1
4Fe-4S binding domain-containing protein.
  
 
 0.859
SEM50114.1
Formate dehydrogenase major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.859
SEM06803.1
4Fe-4S binding domain-containing protein.
  
 
 0.858
SEM50094.1
Formate dehydrogenase major subunit.
 
 0.832
SEL95044.1
Fe-S oxidoreductase.
  
 
 0.821
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.