STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM64839.1NMT1/THI5 like. (149 aa)    
Predicted Functional Partners:
SEM64858.1
sigma-B regulation protein RsbU (phosphoserine phosphatase).
 
     0.945
SEM68379.1
NitT/TauT family transport system ATP-binding protein.
  
 
 0.841
SEM01265.1
PAS domain S-box-containing protein.
    
  0.811
SEM68440.1
NitT/TauT family transport system permease protein.
  
 
 0.803
SEL96326.1
PAS domain S-box-containing protein.
    
  0.796
SEL96462.1
PAS domain S-box-containing protein.
    
  0.796
SEM66668.1
Signal transduction histidine kinase.
    
  0.796
SEM16040.1
PAS domain S-box-containing protein.
    
  0.780
SEM20558.1
PAS domain S-box-containing protein.
    
  0.780
SEM01299.1
PAS domain S-box-containing protein.
    
 0.745
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.