STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM66020.1Serine/threonine protein kinase. (596 aa)    
Predicted Functional Partners:
SEM65988.1
Protein phosphatase.
 0.970
SEM65962.1
FHA domain-containing protein.
 
 
 
 0.900
SEL96326.1
PAS domain S-box-containing protein.
  
 0.868
SEL96462.1
PAS domain S-box-containing protein.
  
 0.868
SEM66668.1
Signal transduction histidine kinase.
  
 0.868
SEM24218.1
PAS domain S-box-containing protein.
  
 0.861
SEM01299.1
PAS domain S-box-containing protein.
    
 0.845
SEM01949.1
PAS domain S-box-containing protein.
    
 0.845
SEM77183.1
PAS domain S-box-containing protein.
    
 0.845
ribBA
GTP cyclohydrolase II /3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
 0.835
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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