STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM67307.1Hypothetical protein. (253 aa)    
Predicted Functional Partners:
SEM67390.1
Iron complex transport system substrate-binding protein.
 
    0.812
SEM67344.1
Iron complex transport system substrate-binding protein.
 
    0.807
SEM67335.1
Enterochelin esterase.
       0.773
SEM67272.1
Outer membrane transport energization protein ExbB.
  
    0.744
SEM67301.1
Biopolymer transport protein ExbD.
       0.741
SEM67168.1
Uncharacterized conserved protein, contains DUF4213 and DUF364 domains.
 
     0.709
SEM67371.1
Methyltransferase domain-containing protein.
 
     0.703
SEM67252.1
Iron complex transport system ATP-binding protein.
 
    0.661
SEM67226.1
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
    0.615
SEM67192.1
Formylmethanofuran dehydrogenase, subunit E.
 
    0.557
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.