STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM67371.1Methyltransferase domain-containing protein. (271 aa)    
Predicted Functional Partners:
SEM67344.1
Iron complex transport system substrate-binding protein.
 
 
   0.921
SEM67390.1
Iron complex transport system substrate-binding protein.
 
 
   0.901
SEL96598.1
1-acyl-sn-glycerol-3-phosphate acyltransferases.
    
 0.824
SEM67419.1
Iron complex outermembrane recepter protein.
 
     0.755
SEM18621.1
NADH-quinone oxidoreductase subunit F.
  
 
 0.753
SEM67192.1
Formylmethanofuran dehydrogenase, subunit E.
 
     0.740
SEM67252.1
Iron complex transport system ATP-binding protein.
 
     0.726
SEM67307.1
Hypothetical protein.
 
     0.703
SEM67335.1
Enterochelin esterase.
       0.628
SEM67226.1
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
     0.625
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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