Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SEL96501.1 | SEM09092.1 | SAMN04489760_101199 | SAMN04489760_1045 | ATP-dependent DNA helicase RecQ. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.852 |
| SEL96501.1 | SEM68597.1 | SAMN04489760_101199 | SAMN04489760_13425 | ATP-dependent DNA helicase RecQ. | UvrD/REP helicase N-terminal domain-containing protein. | 0.896 |
| SEL96501.1 | SEM68654.1 | SAMN04489760_101199 | SAMN04489760_13428 | ATP-dependent DNA helicase RecQ. | Hypothetical protein. | 0.896 |
| SEL96501.1 | SEM68682.1 | SAMN04489760_101199 | SAMN04489760_13429 | ATP-dependent DNA helicase RecQ. | DNA repair ATPase RecN. | 0.594 |
| SEL96501.1 | recA | SAMN04489760_101199 | SAMN04489760_10232 | ATP-dependent DNA helicase RecQ. | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.981 |
| SEM09092.1 | SEL96501.1 | SAMN04489760_1045 | SAMN04489760_101199 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | ATP-dependent DNA helicase RecQ. | 0.852 |
| SEM09092.1 | SEM59464.1 | SAMN04489760_1045 | SAMN04489760_12512 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Hypothetical protein. | 0.601 |
| SEM09092.1 | SEM68597.1 | SAMN04489760_1045 | SAMN04489760_13425 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | UvrD/REP helicase N-terminal domain-containing protein. | 0.820 |
| SEM09092.1 | SEM68654.1 | SAMN04489760_1045 | SAMN04489760_13428 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Hypothetical protein. | 0.820 |
| SEM09092.1 | recA | SAMN04489760_1045 | SAMN04489760_10232 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.936 |
| SEM54365.1 | SEM59425.1 | SAMN04489760_1212 | SAMN04489760_12510 | Type III restriction enzyme. | Adenine-specific DNA-methyltransferase. | 0.887 |
| SEM54365.1 | SEM68597.1 | SAMN04489760_1212 | SAMN04489760_13425 | Type III restriction enzyme. | UvrD/REP helicase N-terminal domain-containing protein. | 0.788 |
| SEM54365.1 | SEM68654.1 | SAMN04489760_1212 | SAMN04489760_13428 | Type III restriction enzyme. | Hypothetical protein. | 0.788 |
| SEM54365.1 | SEM68707.1 | SAMN04489760_1212 | SAMN04489760_13430 | Type III restriction enzyme. | Adenine-specific DNA-methyltransferase. | 0.887 |
| SEM59425.1 | SEM54365.1 | SAMN04489760_12510 | SAMN04489760_1212 | Adenine-specific DNA-methyltransferase. | Type III restriction enzyme. | 0.887 |
| SEM59425.1 | SEM59464.1 | SAMN04489760_12510 | SAMN04489760_12512 | Adenine-specific DNA-methyltransferase. | Hypothetical protein. | 0.911 |
| SEM59425.1 | SEM68597.1 | SAMN04489760_12510 | SAMN04489760_13425 | Adenine-specific DNA-methyltransferase. | UvrD/REP helicase N-terminal domain-containing protein. | 0.785 |
| SEM59425.1 | SEM68654.1 | SAMN04489760_12510 | SAMN04489760_13428 | Adenine-specific DNA-methyltransferase. | Hypothetical protein. | 0.785 |
| SEM59464.1 | SEM09092.1 | SAMN04489760_12512 | SAMN04489760_1045 | Hypothetical protein. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.601 |
| SEM59464.1 | SEM59425.1 | SAMN04489760_12512 | SAMN04489760_12510 | Hypothetical protein. | Adenine-specific DNA-methyltransferase. | 0.911 |
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