STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM70257.1Serpin B; Belongs to the serpin family. (403 aa)    
Predicted Functional Partners:
SEM59634.1
Cysteine protease, C1A family.
   
 0.871
SEM20946.1
Copper-resistance protein, CopA family.
   
  0.805
SEM05805.1
ATPase family associated with various cellular activities (AAA).
    
  0.792
SEM54541.1
Protein of unknown function.
   
 0.784
SEM56002.1
Lectin C-type domain-containing protein.
  
     0.663
SEM70251.1
Uncharacterized protein, pyridoxamine 5'-phosphate oxidase (PNPOx-like) family.
 
     0.570
SEM06311.1
VPLPA-CTERM protein sorting domain-containing protein.
     
 0.552
SEM70284.1
Cupin domain-containing protein.
       0.533
SEM70304.1
Glyoxylase, beta-lactamase superfamily II.
  
    0.525
SEM70326.1
Predicted nuclease of the RNAse H fold, HicB family.
       0.498
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.