STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM70326.1Predicted nuclease of the RNAse H fold, HicB family. (83 aa)    
Predicted Functional Partners:
SEM77754.1
Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family.
 
 
 
 0.907
SEM70304.1
Glyoxylase, beta-lactamase superfamily II.
       0.732
SEM70284.1
Cupin domain-containing protein.
       0.716
SEM58741.1
Uncharacterized conserved protein, DUF433 family.
  
     0.655
SEM77767.1
Predicted nuclease of the RNAse H fold, HicB family.
  
     0.563
SEM70257.1
Serpin B; Belongs to the serpin family.
       0.498
SEM32709.1
Hypothetical protein.
  
     0.497
SEM69105.1
Hypothetical protein.
  
     0.445
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.