STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM70875.1AAA domain-containing protein, putative AbiEii toxin, Type IV TA system. (316 aa)    
Predicted Functional Partners:
SEM70895.1
AAA ATPase domain-containing protein.
      0.976
SEM01509.1
HsdM N-terminal domain-containing protein.
  
  
 0.925
SEM41675.1
Type I restriction enzyme, S subunit.
  
    0.717
SEM70908.1
ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); Belongs to the helicase family. UvrD subfamily.
       0.665
SEM70929.1
PD-(D/E)XK nuclease superfamily protein.
       0.642
SEM41707.1
Type I restriction enzyme M protein.
  
  
 0.616
SEM70953.1
Type I restriction enzyme M protein.
  
  
 0.616
SEM70991.1
Type I restriction enzyme M protein.
  
  
 0.616
SEM70850.1
Hypothetical protein.
       0.518
SEM63276.1
Hypothetical protein.
   
    0.445
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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