STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM72944.1Uncharacterized conserved protein, DUF1015 family. (413 aa)    
Predicted Functional Partners:
SEM41167.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.838
SEM72923.1
tRNA1Val (adenine37-N6)-methyltransferase.
       0.772
SEM01242.1
Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
 
      0.747
SEM10350.1
Phosphoenolpyruvate carboxykinase (ATP).
  
  
  0.483
SEM72973.1
Transposase.
       0.461
SEM70137.1
5'-nucleotidase; Belongs to the 5'-nucleotidase family.
  
  
  0.442
SEM40024.1
Aminomethyltransferase; Belongs to the GcvT family.
    
  0.418
SEM61053.1
L-aspartate aminotransferase apoenzyme.
  
  
  0.401
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.