STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM73369.1Integrase core domain-containing protein. (162 aa)    
Predicted Functional Partners:
SEM75946.1
Transposase.
  
 0.943
SEM73397.1
RNA-directed DNA polymerase.
     
 0.672
SEM47428.1
Transposase (or an inactivated derivative); Required for the transposition of the insertion element.
 
   
 0.584
SEM48412.1
Hypothetical protein.
 
  
 0.575
SEM61530.1
Transposase.
 
     0.544
SEM48437.1
Transposase.
 
     0.530
SEM32860.1
Putative DNA primase/helicase.
     
 0.499
SEM60611.1
Competence protein ComEC.
  
  
 0.491
SEM48395.1
Integrase core domain-containing protein.
 
  
0.407
SEM61551.1
Putative transposase.
 
  
0.406
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.