STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM73690.1General secretion pathway protein G. (137 aa)    
Predicted Functional Partners:
SEM73564.1
General secretion pathway protein J.
  
 0.958
SEM73416.1
Type II secretion system protein D (GspD).
 
  
 0.958
SEM73667.1
General secretion pathway protein E.
 
 0.953
SEM73547.1
General secretion pathway protein K.
 
 
 0.942
SEM73643.1
General secretion pathway protein F.
 
  
 0.931
SEM51895.1
Type II secretion system protein G (GspG).
  
  
 
0.823
SEM51846.1
General secretion pathway protein D.
 
  
 0.814
SEM51863.1
Type II secretion system protein E (GspE); Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 0.810
SEM73467.1
Hypothetical protein.
       0.795
SEM73515.1
Tfp pilus assembly protein PilN.
  
  
 0.793
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.