| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SEL96501.1 | SEM09092.1 | SAMN04489760_101199 | SAMN04489760_1045 | ATP-dependent DNA helicase RecQ. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.852 |
| SEL96501.1 | SEM70908.1 | SAMN04489760_101199 | SAMN04489760_1375 | ATP-dependent DNA helicase RecQ. | ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); Belongs to the helicase family. UvrD subfamily. | 0.514 |
| SEL96501.1 | SEM74886.1 | SAMN04489760_101199 | SAMN04489760_1423 | ATP-dependent DNA helicase RecQ. | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | 0.978 |
| SEL96501.1 | recA | SAMN04489760_101199 | SAMN04489760_10232 | ATP-dependent DNA helicase RecQ. | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.981 |
| SEL96501.1 | recB | SAMN04489760_101199 | SAMN04489760_10556 | ATP-dependent DNA helicase RecQ. | DNA helicase/exodeoxyribonuclease V, beta subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombi [...] | 0.514 |
| SEM09092.1 | SEL96501.1 | SAMN04489760_1045 | SAMN04489760_101199 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | ATP-dependent DNA helicase RecQ. | 0.852 |
| SEM09092.1 | SEM74886.1 | SAMN04489760_1045 | SAMN04489760_1423 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | 0.901 |
| SEM09092.1 | recA | SAMN04489760_1045 | SAMN04489760_10232 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.936 |
| SEM09092.1 | uvrC | SAMN04489760_1045 | SAMN04489760_11946 | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.758 |
| SEM64207.1 | SEM74886.1 | SAMN04489760_12923 | SAMN04489760_1423 | Hypothetical protein. | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | 0.806 |
| SEM64207.1 | recA | SAMN04489760_12923 | SAMN04489760_10232 | Hypothetical protein. | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.809 |
| SEM64207.1 | uvrC | SAMN04489760_12923 | SAMN04489760_11946 | Hypothetical protein. | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.508 |
| SEM70908.1 | SEL96501.1 | SAMN04489760_1375 | SAMN04489760_101199 | ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); Belongs to the helicase family. UvrD subfamily. | ATP-dependent DNA helicase RecQ. | 0.514 |
| SEM70908.1 | SEM74886.1 | SAMN04489760_1375 | SAMN04489760_1423 | ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); Belongs to the helicase family. UvrD subfamily. | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | 0.897 |
| SEM70908.1 | recA | SAMN04489760_1375 | SAMN04489760_10232 | ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); Belongs to the helicase family. UvrD subfamily. | RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.440 |
| SEM74886.1 | SEL96501.1 | SAMN04489760_1423 | SAMN04489760_101199 | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | ATP-dependent DNA helicase RecQ. | 0.978 |
| SEM74886.1 | SEM09092.1 | SAMN04489760_1423 | SAMN04489760_1045 | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.901 |
| SEM74886.1 | SEM64207.1 | SAMN04489760_1423 | SAMN04489760_12923 | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | Hypothetical protein. | 0.806 |
| SEM74886.1 | SEM70908.1 | SAMN04489760_1423 | SAMN04489760_1375 | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); Belongs to the helicase family. UvrD subfamily. | 0.897 |
| SEM74886.1 | SEM79690.1 | SAMN04489760_1423 | SAMN04489760_1495 | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | Repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response). | 0.847 |