STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM75018.1Phage major capsid protein E. (336 aa)    
Predicted Functional Partners:
SEM74998.1
Bacteriophage lambda head decoration protein D.
 
     0.925
SEM74947.1
Phage portal protein, lambda family.
 
     0.903
SEM74972.1
Peptidase family S49.
 
     0.896
SEM78844.1
Phage portal protein, lambda family.
 
     0.788
SEM78883.1
Bacteriophage lambda head decoration protein D.
 
     0.788
SEM82587.1
Phage terminase large subunit (GpA).
 
     0.780
SEM33004.1
Phage terminase, large subunit GpA.
 
     0.779
SEM82084.1
Phage terminase large subunit (GpA).
 
     0.779
SEM75168.1
Prophage minor tail protein Z (GPZ).
 
     0.768
SEM78864.1
Signal peptide peptidase SppA.
 
     0.768
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.