Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEM36838.1 | SEM76828.1 | SAMN04489760_11215 | SAMN04489760_1454 | Replicative DNA helicase. | IstB-like ATP binding protein. | 0.412 |
SEM36838.1 | SEM76851.1 | SAMN04489760_11215 | SAMN04489760_1455 | Replicative DNA helicase. | Hypothetical protein. | 0.412 |
SEM45872.1 | SEM76828.1 | SAMN04489760_11674 | SAMN04489760_1454 | Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | IstB-like ATP binding protein. | 0.412 |
SEM45872.1 | SEM76851.1 | SAMN04489760_11674 | SAMN04489760_1455 | Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | Hypothetical protein. | 0.412 |
SEM76828.1 | SEM36838.1 | SAMN04489760_1454 | SAMN04489760_11215 | IstB-like ATP binding protein. | Replicative DNA helicase. | 0.412 |
SEM76828.1 | SEM45872.1 | SAMN04489760_1454 | SAMN04489760_11674 | IstB-like ATP binding protein. | Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | 0.412 |
SEM76828.1 | SEM76851.1 | SAMN04489760_1454 | SAMN04489760_1455 | IstB-like ATP binding protein. | Hypothetical protein. | 0.598 |
SEM76828.1 | SEM76866.1 | SAMN04489760_1454 | SAMN04489760_1456 | IstB-like ATP binding protein. | Uncharacterized protein, MTH1187 family. | 0.552 |
SEM76851.1 | SEM36838.1 | SAMN04489760_1455 | SAMN04489760_11215 | Hypothetical protein. | Replicative DNA helicase. | 0.412 |
SEM76851.1 | SEM45872.1 | SAMN04489760_1455 | SAMN04489760_11674 | Hypothetical protein. | Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily. | 0.412 |
SEM76851.1 | SEM76828.1 | SAMN04489760_1455 | SAMN04489760_1454 | Hypothetical protein. | IstB-like ATP binding protein. | 0.598 |
SEM76851.1 | SEM76866.1 | SAMN04489760_1455 | SAMN04489760_1456 | Hypothetical protein. | Uncharacterized protein, MTH1187 family. | 0.709 |
SEM76866.1 | SEM76828.1 | SAMN04489760_1456 | SAMN04489760_1454 | Uncharacterized protein, MTH1187 family. | IstB-like ATP binding protein. | 0.552 |
SEM76866.1 | SEM76851.1 | SAMN04489760_1456 | SAMN04489760_1455 | Uncharacterized protein, MTH1187 family. | Hypothetical protein. | 0.709 |