STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM78844.1Phage portal protein, lambda family. (497 aa)    
Predicted Functional Partners:
SEM78864.1
Signal peptide peptidase SppA.
 
    0.947
SEM78883.1
Bacteriophage lambda head decoration protein D.
 
  
 0.923
SEM78906.1
Phage major capsid protein E.
 
     0.903
SEM33004.1
Phage terminase, large subunit GpA.
 
  
 0.802
SEM82084.1
Phage terminase large subunit (GpA).
 
  
 0.802
SEM82587.1
Phage terminase large subunit (GpA).
 
  
 0.802
SEM82502.1
DNA modification methylase.
 
    0.801
SEM32910.1
DNA modification methylase.
 
    0.799
SEM74998.1
Bacteriophage lambda head decoration protein D.
 
  
 0.789
SEM75018.1
Phage major capsid protein E.
 
     0.788
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.