Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SEL96598.1 | SEM11421.1 | SAMN04489760_101204 | SAMN04489760_104122 | 1-acyl-sn-glycerol-3-phosphate acyltransferases. | Mycobactin salicyl-AMP ligase. | 0.948 |
| SEL96598.1 | SEM67335.1 | SAMN04489760_101204 | SAMN04489760_13313 | 1-acyl-sn-glycerol-3-phosphate acyltransferases. | Enterochelin esterase. | 0.554 |
| SEL96598.1 | SEM79827.1 | SAMN04489760_101204 | SAMN04489760_14910 | 1-acyl-sn-glycerol-3-phosphate acyltransferases. | Nicotinamidase-related amidase. | 0.813 |
| SEL96598.1 | menF | SAMN04489760_101204 | SAMN04489760_12910 | 1-acyl-sn-glycerol-3-phosphate acyltransferases. | Isochorismate synthase; Catalyzes the conversion of chorismate to isochorismate. | 0.524 |
| SEL96598.1 | trpE | SAMN04489760_101204 | SAMN04489760_105137 | 1-acyl-sn-glycerol-3-phosphate acyltransferases. | Anthranilate synthase, component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concent [...] | 0.535 |
| SEM05474.1 | SEM11421.1 | SAMN04489760_10394 | SAMN04489760_104122 | Predicted hydrolase of the alpha/beta superfamily. | Mycobactin salicyl-AMP ligase. | 0.776 |
| SEM05474.1 | SEM67335.1 | SAMN04489760_10394 | SAMN04489760_13313 | Predicted hydrolase of the alpha/beta superfamily. | Enterochelin esterase. | 0.482 |
| SEM05474.1 | SEM79827.1 | SAMN04489760_10394 | SAMN04489760_14910 | Predicted hydrolase of the alpha/beta superfamily. | Nicotinamidase-related amidase. | 0.841 |
| SEM05474.1 | menF | SAMN04489760_10394 | SAMN04489760_12910 | Predicted hydrolase of the alpha/beta superfamily. | Isochorismate synthase; Catalyzes the conversion of chorismate to isochorismate. | 0.453 |
| SEM11421.1 | SEL96598.1 | SAMN04489760_104122 | SAMN04489760_101204 | Mycobactin salicyl-AMP ligase. | 1-acyl-sn-glycerol-3-phosphate acyltransferases. | 0.948 |
| SEM11421.1 | SEM05474.1 | SAMN04489760_104122 | SAMN04489760_10394 | Mycobactin salicyl-AMP ligase. | Predicted hydrolase of the alpha/beta superfamily. | 0.776 |
| SEM11421.1 | SEM16456.1 | SAMN04489760_104122 | SAMN04489760_105172 | Mycobactin salicyl-AMP ligase. | Flavodoxin. | 0.489 |
| SEM11421.1 | SEM67335.1 | SAMN04489760_104122 | SAMN04489760_13313 | Mycobactin salicyl-AMP ligase. | Enterochelin esterase. | 0.866 |
| SEM11421.1 | SEM79827.1 | SAMN04489760_104122 | SAMN04489760_14910 | Mycobactin salicyl-AMP ligase. | Nicotinamidase-related amidase. | 0.996 |
| SEM11421.1 | menF | SAMN04489760_104122 | SAMN04489760_12910 | Mycobactin salicyl-AMP ligase. | Isochorismate synthase; Catalyzes the conversion of chorismate to isochorismate. | 0.970 |
| SEM11421.1 | trpE | SAMN04489760_104122 | SAMN04489760_105137 | Mycobactin salicyl-AMP ligase. | Anthranilate synthase, component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concent [...] | 0.870 |
| SEM15750.1 | SEM79827.1 | SAMN04489760_105136 | SAMN04489760_14910 | Anthranilate synthase component 2. | Nicotinamidase-related amidase. | 0.647 |
| SEM15750.1 | menF | SAMN04489760_105136 | SAMN04489760_12910 | Anthranilate synthase component 2. | Isochorismate synthase; Catalyzes the conversion of chorismate to isochorismate. | 0.921 |
| SEM15750.1 | trpE | SAMN04489760_105136 | SAMN04489760_105137 | Anthranilate synthase component 2. | Anthranilate synthase, component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concent [...] | 0.999 |
| SEM16456.1 | SEM11421.1 | SAMN04489760_105172 | SAMN04489760_104122 | Flavodoxin. | Mycobactin salicyl-AMP ligase. | 0.489 |
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