STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM81415.1Exopolysaccharide biosynthesis protein EpsI, predicted pyruvyl transferase. (357 aa)    
Predicted Functional Partners:
SEM81403.1
Radical SAM superfamily protein.
       0.785
SEM54977.1
Glycosyltransferase, GT2 family.
  
 
 0.703
SEM04983.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
  
 0.696
SEL98580.1
Glycosyltransferase involved in cell wall bisynthesis.
    0.619
SEM05037.1
NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.
  
  
 0.601
SEM81374.1
Radical SAM additional 4Fe4S-binding SPASM domain-containing protein.
       0.502
SEM04838.1
Polysaccharide transporter, PST family.
 
  
 0.451
SEM57530.1
Mannose-6-phosphate isomerase, cupin superfamily.
  
 
 0.431
SEM81448.1
IS4 transposase.
       0.425
SEL94859.1
Alg9-like mannosyltransferase family protein.
  
 
 0.424
Your Current Organism:
Syntrophus gentianae
NCBI taxonomy Id: 43775
Other names: CIP 105111, DSM 8423, S. gentianae, strain HQG1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.