Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEL99073.1 | SEM82869.1 | SAMN04489760_10230 | SAMN04489760_1565 | Competence/damage-inducible protein cinA; Belongs to the CinA family. | VPLPA-CTERM protein sorting domain-containing protein/choice-of-anchor C domain-containing protein. | 0.757 |
SEM05956.1 | SEM82869.1 | SAMN04489760_103119 | SAMN04489760_1565 | Putative baseplate assembly protein. | VPLPA-CTERM protein sorting domain-containing protein/choice-of-anchor C domain-containing protein. | 0.447 |
SEM82869.1 | SEL99073.1 | SAMN04489760_1565 | SAMN04489760_10230 | VPLPA-CTERM protein sorting domain-containing protein/choice-of-anchor C domain-containing protein. | Competence/damage-inducible protein cinA; Belongs to the CinA family. | 0.757 |
SEM82869.1 | SEM05956.1 | SAMN04489760_1565 | SAMN04489760_103119 | VPLPA-CTERM protein sorting domain-containing protein/choice-of-anchor C domain-containing protein. | Putative baseplate assembly protein. | 0.447 |