STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3K7F2_9FIRMUncharacterized protein. (286 aa)    
Predicted Functional Partners:
H3K7F1_9FIRM
Threonine-phosphate decarboxylase.
 
 
 0.984
H3K8Q0_9FIRM
Uncharacterized protein.
 
  
 0.810
H3K7F3_9FIRM
TrkH family potassium uptake protein.
       0.752
H3K7F5_9FIRM
Uncharacterized protein.
 
     0.680
H3K7F4_9FIRM
TrkH family potassium uptake protein.
       0.649
cbiD
Cobalt-precorrin-5B C(1)-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
 
  
 0.642
H3K7F6_9FIRM
Uncharacterized protein.
       0.636
H3KAI3_9FIRM
Uncharacterized protein.
  
     0.562
H3K8P8_9FIRM
Precorrin-6x reductase.
 
  
 0.551
H3K8P7_9FIRM
CbiC domain-containing protein.
 
    0.538
Your Current Organism:
Megamonas funiformis
NCBI taxonomy Id: 437897
Other names: DSM 19343, JCM 14723, M. funiformis, Megamonas funiformis Sakon et al. 2008, Megamonas sp. Marseille-P3344, YIT 11815
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.