STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RfbBdTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (339 aa)    
Predicted Functional Partners:
GCA_900128435_00946
annotation not available
  
  
 0.885
H3KA32_9FIRM
UDP-glucose 6-dehydrogenase.
 
  
 0.807
H3K9P3_9FIRM
Uncharacterized protein; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.779
H3KA95_9FIRM
KpsF/GutQ family sugar isomerase; Belongs to the SIS family. GutQ/KpsF subfamily.
  
  
 0.608
WecB
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.599
H3K704_9FIRM
GalKase_gal_bdg domain-containing protein; Belongs to the GHMP kinase family.
  
  
 0.574
H3KAG3_9FIRM
Uncharacterized protein.
   
  
 0.550
WbaP
Undecaprenyl-phosphate galactose phosphotransferase, WbaP.
 
  
 0.538
GCA_900128435_00897
annotation not available
  
  
 0.537
GalE
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
  
0.532
Your Current Organism:
Megamonas funiformis
NCBI taxonomy Id: 437897
Other names: DSM 19343, JCM 14723, M. funiformis, Megamonas funiformis Sakon et al. 2008, Megamonas sp. Marseille-P3344, YIT 11815
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.