STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900128435_00958annotation not available (121 aa)    
Predicted Functional Partners:
H3K9T8_9FIRM
Uncharacterized protein.
  
 
 0.781
GCA_900128435_00957
annotation not available
       0.773
WbaP
Undecaprenyl-phosphate galactose phosphotransferase, WbaP.
  
  
 0.555
H3KAK4_9FIRM
Iron-sulfur cluster carrier protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 
 0.535
GCA_900128435_00662
annotation not available
  
 
 0.535
GCA_900128435_00959
annotation not available
       0.522
H3KAL8_9FIRM
Uncharacterized protein.
  
  
 0.447
Your Current Organism:
Megamonas funiformis
NCBI taxonomy Id: 437897
Other names: DSM 19343, JCM 14723, M. funiformis, Megamonas funiformis Sakon et al. 2008, Megamonas sp. Marseille-P3344, YIT 11815
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.