GCA_900128435_01717 protein (Megamonas funiformis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

GCA_900128435_01717

annotation not available (375 aa)

Predicted Functional Partners:

GCA_900128435_01716

0.880

H3K8A6_9FIRM

0.628

GCA_900128435_01715

0.551

TnpA-2

0.492

GCA_900128435_01004

0.492

GCA_900128435_02211

0.492

Your Current Organism:

Megamonas funiformis

NCBI taxonomy Id: 437897
Other names: DSM 19343, JCM 14723, M. funiformis, Megamonas funiformis Sakon et al. 2008, Megamonas sp. Marseille-P3344, YIT 11815

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GCA_900128435_01004	GCA_900128435_01717	GCA_900128435_01004	GCA_900128435_01717	annotation not available	annotation not available	0.492
GCA_900128435_01715	GCA_900128435_01716	GCA_900128435_01715	GCA_900128435_01716	annotation not available	annotation not available	0.551
GCA_900128435_01715	GCA_900128435_01717	GCA_900128435_01715	GCA_900128435_01717	annotation not available	annotation not available	0.551
GCA_900128435_01715	H3K8A6_9FIRM	GCA_900128435_01715	GCA_900128435_01718	annotation not available	Uncharacterized protein.	0.986
GCA_900128435_01716	GCA_900128435_01715	GCA_900128435_01716	GCA_900128435_01715	annotation not available	annotation not available	0.551
GCA_900128435_01716	GCA_900128435_01717	GCA_900128435_01716	GCA_900128435_01717	annotation not available	annotation not available	0.880
GCA_900128435_01716	H3K8A6_9FIRM	GCA_900128435_01716	GCA_900128435_01718	annotation not available	Uncharacterized protein.	0.628
GCA_900128435_01717	GCA_900128435_01004	GCA_900128435_01717	GCA_900128435_01004	annotation not available	annotation not available	0.492
GCA_900128435_01717	GCA_900128435_01715	GCA_900128435_01717	GCA_900128435_01715	annotation not available	annotation not available	0.551
GCA_900128435_01717	GCA_900128435_01716	GCA_900128435_01717	GCA_900128435_01716	annotation not available	annotation not available	0.880
GCA_900128435_01717	GCA_900128435_02211	GCA_900128435_01717	GCA_900128435_02211	annotation not available	annotation not available	0.492
GCA_900128435_01717	H3K8A6_9FIRM	GCA_900128435_01717	GCA_900128435_01718	annotation not available	Uncharacterized protein.	0.628
GCA_900128435_01717	TnpA-2	GCA_900128435_01717	GCA_900128435_00996	annotation not available	Y1_Tnp domain-containing protein.	0.492
GCA_900128435_02211	GCA_900128435_01717	GCA_900128435_02211	GCA_900128435_01717	annotation not available	annotation not available	0.492
H3K8A6_9FIRM	GCA_900128435_01715	GCA_900128435_01718	GCA_900128435_01715	Uncharacterized protein.	annotation not available	0.986
H3K8A6_9FIRM	GCA_900128435_01716	GCA_900128435_01718	GCA_900128435_01716	Uncharacterized protein.	annotation not available	0.628
H3K8A6_9FIRM	GCA_900128435_01717	GCA_900128435_01718	GCA_900128435_01717	Uncharacterized protein.	annotation not available	0.628
TnpA-2	GCA_900128435_01717	GCA_900128435_00996	GCA_900128435_01717	Y1_Tnp domain-containing protein.	annotation not available	0.492