Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
H3K5R4_9FIRM | H3K7Z6_9FIRM | GCA_900128435_00017 | GCA_900128435_01850 | PRK domain-containing protein. | Pyrimidine-nucleoside phosphorylase. | 0.925 |
H3K5R4_9FIRM | cmk | GCA_900128435_00017 | GCA_900128435_02078 | PRK domain-containing protein. | Cytidylate kinase. | 0.928 |
H3K5R4_9FIRM | guaA | GCA_900128435_00017 | GCA_900128435_01961 | PRK domain-containing protein. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.501 |
H3K5R4_9FIRM | pyrF | GCA_900128435_00017 | GCA_900128435_00611 | PRK domain-containing protein. | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.923 |
H3K5R4_9FIRM | pyrH | GCA_900128435_00017 | GCA_900128435_00438 | PRK domain-containing protein. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.934 |
H3K5R4_9FIRM | pyrR | GCA_900128435_00017 | GCA_900128435_02017 | PRK domain-containing protein. | Pyrimidine operon regulatory protein; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily. | 0.919 |
H3K5R4_9FIRM | surE | GCA_900128435_00017 | GCA_900128435_02039 | PRK domain-containing protein. | 5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.922 |
H3K7K8_9FIRM | H3K8Y1_9FIRM | GCA_900128435_01984 | GCA_900128435_01308 | Inosine-5'-monophosphate dehydrogenase. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.741 |
H3K7K8_9FIRM | guaA | GCA_900128435_01984 | GCA_900128435_01961 | Inosine-5'-monophosphate dehydrogenase. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.999 |
H3K7K8_9FIRM | pyrF | GCA_900128435_01984 | GCA_900128435_00611 | Inosine-5'-monophosphate dehydrogenase. | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.509 |
H3K7K8_9FIRM | surE | GCA_900128435_01984 | GCA_900128435_02039 | Inosine-5'-monophosphate dehydrogenase. | 5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.931 |
H3K7Z6_9FIRM | H3K5R4_9FIRM | GCA_900128435_01850 | GCA_900128435_00017 | Pyrimidine-nucleoside phosphorylase. | PRK domain-containing protein. | 0.925 |
H3K7Z6_9FIRM | guaA | GCA_900128435_01850 | GCA_900128435_01961 | Pyrimidine-nucleoside phosphorylase. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.555 |
H3K7Z6_9FIRM | pyrR | GCA_900128435_01850 | GCA_900128435_02017 | Pyrimidine-nucleoside phosphorylase. | Pyrimidine operon regulatory protein; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily. | 0.915 |
H3K7Z6_9FIRM | surE | GCA_900128435_01850 | GCA_900128435_02039 | Pyrimidine-nucleoside phosphorylase. | 5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.931 |
H3K8Y1_9FIRM | H3K7K8_9FIRM | GCA_900128435_01308 | GCA_900128435_01984 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Inosine-5'-monophosphate dehydrogenase. | 0.741 |
H3K8Y1_9FIRM | adk | GCA_900128435_01308 | GCA_900128435_01685 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 0.944 |
H3K8Y1_9FIRM | guaA | GCA_900128435_01308 | GCA_900128435_01961 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.864 |
H3K8Y1_9FIRM | pyrF | GCA_900128435_01308 | GCA_900128435_00611 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.492 |
H3K8Y1_9FIRM | surE | GCA_900128435_01308 | GCA_900128435_02039 | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.922 |
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