Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
H3K4R2_9FIRM | H3K4R3_9FIRM | GCA_900128435_02219 | GCA_900128435_02220 | TonB family domain-containing protein. | Uncharacterized protein. | 0.951 |
H3K4R2_9FIRM | H3K4R4_9FIRM | GCA_900128435_02219 | GCA_900128435_02221 | TonB family domain-containing protein. | MotA_ExbB domain-containing protein. | 0.930 |
H3K4R2_9FIRM | H3K4U2_9FIRM | GCA_900128435_02219 | GCA_900128435_02253 | TonB family domain-containing protein. | Uncharacterized protein. | 0.786 |
H3K4R2_9FIRM | H3K4V3_9FIRM | GCA_900128435_02219 | GCA_900128435_02263 | TonB family domain-containing protein. | Uncharacterized protein. | 0.743 |
H3K4R2_9FIRM | H3K9F9_9FIRM | GCA_900128435_02219 | GCA_900128435_01098 | TonB family domain-containing protein. | Uncharacterized protein. | 0.792 |
H3K4R2_9FIRM | H3KA78_9FIRM | GCA_900128435_02219 | GCA_900128435_00800 | TonB family domain-containing protein. | Uncharacterized protein. | 0.504 |
H3K4R3_9FIRM | H3K4R2_9FIRM | GCA_900128435_02220 | GCA_900128435_02219 | Uncharacterized protein. | TonB family domain-containing protein. | 0.951 |
H3K4R3_9FIRM | H3K4R4_9FIRM | GCA_900128435_02220 | GCA_900128435_02221 | Uncharacterized protein. | MotA_ExbB domain-containing protein. | 0.981 |
H3K4R3_9FIRM | H3K4V3_9FIRM | GCA_900128435_02220 | GCA_900128435_02263 | Uncharacterized protein. | Uncharacterized protein. | 0.552 |
H3K4R3_9FIRM | H3KA78_9FIRM | GCA_900128435_02220 | GCA_900128435_00800 | Uncharacterized protein. | Uncharacterized protein. | 0.556 |
H3K4R3_9FIRM | H3KA80_9FIRM | GCA_900128435_02220 | GCA_900128435_00798 | Uncharacterized protein. | Outer membrane protein assembly complex, YaeT protein. | 0.730 |
H3K4R3_9FIRM | H3KAA1_9FIRM | GCA_900128435_02220 | GCA_900128435_00777 | Uncharacterized protein. | Uncharacterized protein. | 0.671 |
H3K4R3_9FIRM | LptB | GCA_900128435_02220 | GCA_900128435_00778 | Uncharacterized protein. | ABC transporter domain-containing protein. | 0.611 |
H3K4R3_9FIRM | lpxA | GCA_900128435_02220 | GCA_900128435_00790 | Uncharacterized protein. | Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.448 |
H3K4R4_9FIRM | H3K4R2_9FIRM | GCA_900128435_02221 | GCA_900128435_02219 | MotA_ExbB domain-containing protein. | TonB family domain-containing protein. | 0.930 |
H3K4R4_9FIRM | H3K4R3_9FIRM | GCA_900128435_02221 | GCA_900128435_02220 | MotA_ExbB domain-containing protein. | Uncharacterized protein. | 0.981 |
H3K4R4_9FIRM | H3K4U2_9FIRM | GCA_900128435_02221 | GCA_900128435_02253 | MotA_ExbB domain-containing protein. | Uncharacterized protein. | 0.913 |
H3K4R4_9FIRM | H3K4V3_9FIRM | GCA_900128435_02221 | GCA_900128435_02263 | MotA_ExbB domain-containing protein. | Uncharacterized protein. | 0.708 |
H3K4R4_9FIRM | H3K9F9_9FIRM | GCA_900128435_02221 | GCA_900128435_01098 | MotA_ExbB domain-containing protein. | Uncharacterized protein. | 0.919 |
H3K4R4_9FIRM | H3KA78_9FIRM | GCA_900128435_02221 | GCA_900128435_00800 | MotA_ExbB domain-containing protein. | Uncharacterized protein. | 0.710 |
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