STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001940335_01188Unannotated protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family. (602 aa)    
Predicted Functional Partners:
GCA_001940335_00346
Unannotated protein.
  
 
 0.983
GCA_001940335_00983
Unannotated protein; Belongs to the flagella basal body rod proteins family.
    
   0.960
GCA_001940335_00433
Unannotated protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
 
   
0.709
GCA_001940335_01538
Unannotated protein.
 
 
 0.648
GCA_001940335_00498
Unannotated protein; Belongs to the PEP-utilizing enzyme family.
 
  
  0.641
GCA_001940335_00389
Unannotated protein.
    
  0.640
GCA_001940335_03122
Unannotated protein; Accepts electrons from ETF and reduces ubiquinone.
  
  
 0.588
GCA_001940335_00872
Unannotated protein.
   
 
 0.583
GCA_001940335_01324
Unannotated protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
   
 
 0.583
GCA_001940335_04456
Unannotated protein.
 
   
 0.574
Your Current Organism:
Pseudomonas marincola
NCBI taxonomy Id: 437900
Other names: JCM 14761, KMM 3042, NRIC 0729, P. marincola, Pseudomonas marincola Romanenko et al. 2008, Pseudomonas sp. SI85-2B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.