STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_0068Glycosyltransferase. (392 aa)    
Predicted Functional Partners:
AZC_0067
Conserved hypothetical protein.
   0.977
AZC_0070
Putative histone acetyltransferase; HPA2 and related acetyltransferase.
 
     0.944
AZC_0069
Putative selenophosphate synthetase-related protein.
 
     0.943
AZC_0071
Biotin synthase-related enzyme.
 
     0.943
AZC_0066
Putative flavoprotein involved in K+ transport.
 
   0.922
AZC_0072
Putative amidohydrolase.
 
    0.881
AZC_0073
Conserved hypothetical protein.
 
     0.841
AZC_0065
Hypothetical protein.
  
  
 0.759
AZC_1403
Putative 1,4-alpha-glucan branching enzyme protein.
   
 0.509
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.509
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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