STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_0089Hypothetical protein. (179 aa)    
Predicted Functional Partners:
AZC_0090
Response regulator receiver.
 
     0.660
hemY
Putative HemY protein; N-terminal precursor.
  
     0.478
AZC_0091
Cyclic nucleotide-binding protein.
       0.472
AZC_0279
Cell wall-associated hydrolase.
 
   
 0.435
AZC_3512
Hypothetical protein.
  
     0.435
AZC_4697
Conserved hypothetical protein.
  
     0.430
AZC_0088
Hypothetical protein.
       0.429
AZC_3511
Double-transmembrane region; N-terminal.
  
     0.424
AZC_0087
Conserved hypothetical protein; Lipase including active site.
       0.410
praR
Putative transcriptional regulator; PhrR-like regulator conserved in the Alphaproteobacteria; helix-turn-helix motif; praR is involved in the expression of reb genes.
  
     0.409
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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