STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_0182Putative outer membrane receptor protein; Mostly Fe transport. (731 aa)    
Predicted Functional Partners:
fecR-2
Putative iron siderophore sensor protein.
 
 
 0.840
fecR-3
Putative iron siderophore sensor protein.
 
 
 0.832
fecR
FecR protein.
 
 
 0.744
AZC_3246
Vicibactin biosynthesis non-ribosomal peptide synthase protein.
  
  
 0.739
AZC_1260
C-terminal TonB protein.
 
 
 0.576
AZC_3988
ABC-type siderophore export system; Fused ATPase and permease components.
 
  
 0.564
AZC_0186
Putative ABC transporter iron compound-binding protein.
 
   
 0.559
AZC_1256
TonB-dependent receptor.
 
  
 0.557
fepC
Putative ferric enterobactin transport ATP-binding protein.
 
  
 0.528
AZC_1328
TonB-dependent receptor.
 
  
 0.518
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.